If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ), 'gf_id' => 'HOM05D000557', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000557' ), 'data_identifier' => 'HOM05D000557', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000557', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '991', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p22880' => 'bna', 'A02p34650' => 'bna', 'A03p33510' => 'bna', 'A05p43230' => 'bna', 'A06p08770' => 'bna', 'A06p09580' => 'bna', 'A06p12220' => 'bna', 'A06p41840' => 'bna', 'A07p27090' => 'bna', 'A08p07650' => 'bna', 'A08p32290' => 'bna', 'A09p62980' => 'bna', 'A09p63540' => 'bna', 'Aa31LG1G1570' => 'aar', 'Aa31LG1G1880' => 'aar', 'Aa31LG2G5900' => 'aar', 'Aa31LG4G1480' => 'aar', 'Aa31LG5G14660' => 'aar', 'Aa31sc158G20' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1906' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.603' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_120.2' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1278' => 'aag', 'Actinidia05938' => 'ach', 'Actinidia08090' => 'ach', 'Actinidia12762' => 'ach', 'Actinidia17064' => 'ach', 'Actinidia22102' => 'ach', 'Actinidia25398' => 'ach', 'Actinidia25399' => 'ach', 'Actinidia25754' => 'ach', 'Actinidia28612' => 'ach', 'Actinidia28613' => 'ach', 'Actinidia30571' => 'ach', 'Actinidia30678' => 'ach', 'Actinidia35419' => 'ach', 'Actinidia35420' => 'ach', 'Actinidia37912' => 'ach', 'Ah.02g115080' => 'amhyb', 'Ah.02g130560' => 'amhyb', 'Ah.03g133820' => 'amhyb', 'Ah.04g162810' => 'amhyb', 'Ah.16g106120' => 'amhyb', 'AL1G24540' => 'aly', 'AL1G25200' => 'aly', 'AL1G28420' => 'aly', 'AL1G51430' => 'aly', 'AL2G40170' => 'aly', 'AL3G14020' => 'aly', 'AL5G15490' => 'aly', 'Aqoxy1G01410' => 'aox', 'Aqoxy3G01441' => 'aox', 'Aqoxy3G02756' => 'aox', 'Aqoxy4G01965' => 'aox', 'Aqoxy5G03533' => 'aox', 'Aqoxy6G01572' => 'aox', 'Aqoxy72s009' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5PGU74' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6W2CKZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8EQN3M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UAX1T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5EUQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFW5UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2DMXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F06IQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FN6RIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HFT5ZK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV44JT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHP0ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIHD8Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V4VETE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VRBE94' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7XEC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YL3Z6V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM1UGV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZX8DBB' => 'arhy', 'AT1G12900' => 'ath', 'AT1G13440' => 'ath', 'AT1G16300' => 'ath', 'AT1G42970' => 'ath', 'AT1G79530' => 'ath', 'AT3G04120' => 'ath', 'AT3G26650' => 'ath', 'ATR0111G001' => 'atr', 'ATR0111G008' => 'atr', 'ATR0111G029' => 'atr', 'ATR0111G035' => 'atr', 'ATR0582G050' => 'atr', 'ATR0763G162' => 'atr', 'ATR0787G091' => 'atr', 'ATR0807G218' => 'atr', 'Atru.chr1.80' => 'acertr', 'Atru.chr11.2236' => 'acertr', 'Atru.chr13.92' => 'acertr', 'Atru.chr6.2738' => 'acertr', 'Atru.chr6.2739' => 'acertr', 'Atru.chr9.1021' => 'acertr', 'AUR62005566' => 'cqu', 'AUR62024167' => 'cqu', 'AUR62025870' => 'cqu', 'AUR62029841' => 'cqu', 'AUR62035540' => 'cqu', 'AUR62037544' => 'cqu', 'AUR62037657' => 'cqu', 'AUR62041490' => 'cqu', 'AUR62042589' => 'cqu', 'BcaB02g06609' => 'bca', 'BcaB02g07221' => 'bca', 'BcaB03g13140' => 'bca', 'BcaB04g17773' => 'bca', 'BcaB05g25204' => 'bca', 'BcaB07g30222' => 'bca', 'BcaB07g30224' => 'bca', 'BcaB08g34242' => 'bca', 'BcaC01g04386' => 'bca', 'BcaC03g15902' => 'bca', 'BcaC03g17376' => 'bca', 'BcaC05g25105' => 'bca', 'BcaC05g25144' => 'bca', 'BcaC05g25586' => 'bca', 'BcaC05g29965' => 'bca', 'BcaC05g30217' => 'bca', 'BcaC06g31052' => 'bca', 'BcaC07g37451' => 'bca', 'BcaC07g38693' => 'bca', 'BcaC07g39256' => 'bca', 'BcaC07g41641' => 'bca', 'BcaC08g45349' => 'bca', 'BolC1t05761H' => 'bol', 'BolC2t09664H' => 'bol', 'BolC2t11393H' => 'bol', 'BolC3t16338H' => 'bol', 'BolC5t29783H' => 'bol', 'BolC5t29878H' => 'bol', 'BolC5t30172H' => 'bol', 'BolC5t34952H' => 'bol', 'BolC6t38145H' => 'bol', 'BolC7t44089H' => 'bol', 'BolC8t47772H' => 'bol', 'BolC8t49239H' => 'bol', 'BolC8t50973H' => 'bol', 'BolC8t52193H' => 'bol', 'BolC8t52244H' => 'bol', 'BraA01t04531Z' => 'bra', 'BraA02t07288Z' => 'bra', 'BraA02t08473Z' => 'bra', 'BraA03t12526Z' => 'bra', 'BraA05t23065Z' => 'bra', 'BraA06t24074Z' => 'bra', 'BraA06t24148Z' => 'bra', 'BraA06t24390Z' => 'bra', 'BraA06t27103Z' => 'bra', 'BraA07t30354Z' => 'bra', 'BraA08t32779Z' => 'bra', 'BraA08t35153Z' => 'bra', 'BraA09t41656Z' => 'bra', 'BraA09t41705Z' => 'bra', 'C02p36690' => 'bna', 'C02p53210' => 'bna', 'C03p40720' => 'bna', 'C05p10360' => 'bna', 'C05p11290' => 'bna', 'C05p14460' => 'bna', 'C05p62970' => 'bna', 'C06p29840' => 'bna', 'C07p35680' => 'bna', 'C08p09230' => 'bna', 'C08p16180' => 'bna', 'C08p19620' => 'bna', 'C08p46430' => 'bna', 'C08p47040' => 'bna', 'CAN.G13.3' => 'can', 'CAN.G134.206' => 'can', 'CAN.G205.18' => 'can', 'CAN.G208.29' => 'can', 'CAN.G2106.3' => 'can', 'CAN.G274.11' => 'can', 'CAN.G492.79' => 'can', 'CAN.G86.3' => 'can', 'CAN.G912.2' => 'can', 'CANSAT01G2507' => 'cansat', 'CANSAT56G1902' => 'cansat', 'CANSAT64G1693' => 'cansat', 'CANSAT80G2137' => 'cansat', 'CARHR013230' => 'chi', 'CARHR013250' => 'chi', 'CARHR013790' => 'chi', 'CARHR016770' => 'chi', 'CARHR035230' => 'chi', 'CARHR073200' => 'chi', 'CARHR078250' => 'chi', 'Carub.0001s1267' => 'cru', 'Carub.0001s1314' => 'cru', 'Carub.0001s1604' => 'cru', 'Carub.0001s3435' => 'cru', 'Carub.0002s2639' => 'cru', 'Carub.0003s0335' => 'cru', 'Carub.0005s0466' => 'cru', 'Ca_03550_v3' => 'car', 'Ca_04400_v3' => 'car', 'Ca_08238_v3' => 'car', 'Ca_15398_v3' => 'car', 'Ca_16488_v3' => 'car', 'Ca_27833_v3' => 'car', 'CBR_g18746' => 'cbr', 'CBR_g18748' => 'cbr', 'CBR_g18750' => 'cbr', 'CBR_g18751' => 'cbr', 'CBR_g18752' => 'cbr', 'CBR_g18753' => 'cbr', 'CBR_g18755' => 'cbr', 'CBR_g20089' => 'cbr', 'CBR_g20091' => 'cbr', 'CBR_g23805' => 'cbr', 'CBR_g23806' => 'cbr', 'CBR_g28750' => 'cbr', 'CBR_g31746' => 'cbr', 'CBR_g36993' => 'cbr', 'CBR_g39015' => 'cbr', 'CBR_g41156' => 'cbr', 'CBR_g46672' => 'cbr', 'CBR_g57305' => 'cbr', 'CBR_g57307' => 'cbr', 'CBR_g594' => 'cbr', 'CBR_g68000' => 'cbr', 'CBR_g86139' => 'cbr', 'Cc00_g22510' => 'ccan', 'Cc05_g16480' => 'ccan', 'Cc07_g00460' => 'ccan', 'Cc09_g08110' => 'ccan', 'Cc10_g00410' => 'ccan', 'Cc11_g00610' => 'ccan', 'Cc11_g16510' => 'ccan', 'CDE02G1667' => 'cde', 'CDE02G2976' => 'cde', 'CDE02G3901' => 'cde', 'CDE04G2407' => 'cde', 'CDE05G1010' => 'cde', 'CDE11G0230' => 'cde', 'Cfa009477' => 'cfa', 'Cfa014118' => 'cfa', 'Cfa019389' => 'cfa', 'Cfa021006' => 'cfa', 'Ciclev10001114m.g' => 'ccl', 'Ciclev10005029m.g' => 'ccl', 'Ciclev10015476m.g' => 'ccl', 'Ciclev10017767m.g' => 'ccl', 'Ciclev10021037m.g' => 'ccl', 'Ciclev10032014m.g' => 'ccl', 'CiPaw.04G033500' => 'cil', 'CiPaw.04G035700' => 'cil', 'CiPaw.05G097400' => 'cil', 'CiPaw.05G116200' => 'cil', 'CiPaw.06G099300' => 'cil', 'CiPaw.06G111800' => 'cil', 'CiPaw.07G135400' => 'cil', 'CiPaw.08G075900' => 'cil', 'CiPaw.11G011100' => 'cil', 'CiPaw.11G059600' => 'cil', 'ClCG02G018680' => 'cla', 'ClCG03G003570' => 'cla', 'ClCG05G012430' => 'cla', 'ClCG09G022760' => 'cla', 'ClCG11G006840' => 'cla', 'ClCG11G018880' => 'cla', 'COL.COLO4_05638' => 'col', 'COL.COLO4_05639' => 'col', 'COL.COLO4_13410' => 'col', 'COL.COLO4_16834' => 'col', 'COL.COLO4_23613' => 'col', 'Cpa.g.sc130.34' => 'cpa', 'Cpa.g.sc26.159' => 'cpa', 'Cpa.g.sc32.53' => 'cpa', 'Cpa.g.sc4.81' => 'cpa', 'Cpa.g.sc70.33' => 'cpa', 'Cre01.g010900' => 'cre', 'Cre07.g354200' => 'cre', 'Cre12.g485150' => 'cre', 'CsaV3_1G009410' => 'csa', 'CsaV3_1G009420' => 'csa', 'CsaV3_3G020110' => 'csa', 'CsaV3_4G037480' => 'csa', 'CsaV3_6G001210' => 'csa', 'CsaV3_6G013490' => 'csa', 'CsaV3_7G022960' => 'csa', 'CSS0000856' => 'camsi', 'CSS0002062' => 'camsi', 'CSS0007620' => 'camsi', 'CSS0016228' => 'camsi', 'CSS0022957' => 'camsi', 'CSS0023562' => 'camsi', 'CSS0023920' => 'camsi', 'CSS0027832' => 'camsi', 'CSS0028943' => 'camsi', 'CSS0032053' => 'camsi', 'CSS0032823' => 'camsi', 'CSS0033284' => 'camsi', 'CSS0043619' => 'camsi', 'CSS0050274' => 'camsi', 'DCAR_002603' => 'dca', 'DCAR_009655' => 'dca', 'DCAR_011294' => 'dca', 'DCAR_013933' => 'dca', 'DCAR_016414' => 'dca', 'DCAR_019913' => 'dca', 'DCAR_021612' => 'dca', 'DCAR_022989' => 'dca', 'DCAR_030363' => 'dca', 'DCAR_031180' => 'dca', 'Dinv02100' => 'din', 'Dinv04687' => 'din', 'Dinv04846' => 'din', 'Dinv10996' => 'din', 'Dinv10997' => 'din', 'Dinv11103' => 'din', 'Dinv19581' => 'din', 'Dinv23122' => 'din', 'Dinv25276' => 'din', 'Dinv25690' => 'din', 'Dinv31025' => 'din', 'Dinv31972' => 'din', 'Dinv33380' => 'din', 'Dinv42471' => 'din', 'Duzib041G0556' => 'dzi', 'Duzib093G0659' => 'dzi', 'Duzib147G0959' => 'dzi', 'Duzib147G1485' => 'dzi', 'Duzib187G0868' => 'dzi', 'Duzib187G0890' => 'dzi', 'Duzib205G1107' => 'dzi', 'Duzib243G0001' => 'dzi', 'Duzib251G0059' => 'dzi', 'Duzib264G1080' => 'dzi', 'Duzib268G0676' => 'dzi', 'Duzib268G1113' => 'dzi', 'ECA232G2472' => 'eca', 'ECA232G4610' => 'eca', 'ECA233G2035' => 'eca', 'ECA234G1374' => 'eca', 'ECA234G3368' => 'eca', 'ECA236G1639' => 'eca', 'ECA246G2576' => 'eca', 'ECA246G3063' => 'eca', 'EL10Ac1g01901' => 'bvu', 'EL10Ac2g03286' => 'bvu', 'EL10Ac4g08374' => 'bvu', 'EL10Ac4g08851' => 'bvu', 'EL10Ac6g13427' => 'bvu', 'EL10Ac8g19869' => 'bvu', 'EL10As4g23467' => 'bvu', 'Eucgr.B00144' => 'egr', 'Eucgr.E03076' => 'egr', 'Eucgr.F01793' => 'egr', 'Eucgr.F04466' => 'egr', 'Eucgr.H02597' => 'egr', 'Eucgr.H04673' => 'egr', 'Eucgr.I01564' => 'egr', 'Eucgr.J02288' => 'egr', 'Eucgr.J02291' => 'egr', 'Eucgr.J02292' => 'egr', 'Eucgr.L03143' => 'egr', 'FAN02G1391' => 'fan', 'FAN04G0016' => 'fan', 'FAN07G1009' => 'fan', 'FAN08G0015' => 'fan', 'FAN08G0407' => 'fan', 'FAN09G1085' => 'fan', 'FAN09G1887' => 'fan', 'FAN09G2271' => 'fan', 'FAN09G3307' => 'fan', 'FAN09G4469' => 'fan', 'FAN11G3495' => 'fan', 'FAN12G0433' => 'fan', 'FAN13G1774' => 'fan', 'FAN14G1712' => 'fan', 'FAN14G1714' => 'fan', 'FAN16G1820' => 'fan', 'FAN17G0463' => 'fan', 'FAN18G1514' => 'fan', 'FAN18G3899' => 'fan', 'FAN21G0624' => 'fan', 'FAN22G2152' => 'fan', 'FvH4_3g14640' => 'fve', 'FvH4_4g24420' => 'fve', 'FvH4_5g07640' => 'fve', 'FvH4_5g25760' => 'fve', 'FvH4_6g52741' => 'fve', 'FvH4_6g52750' => 'fve', 'FvH4_6g52752' => 'fve', 'FvH4_6g52754' => 'fve', 'FvH4_6g52755' => 'fve', 'FvH4_6g54460' => 'fve', 'Glyma.01G051800' => 'gma', 'Glyma.02G068800' => 'gma', 'Glyma.03G092700' => 'gma', 'Glyma.04G015900' => 'gma', 'Glyma.04G193400' => 'gma', 'Glyma.04G193500' => 'gma', 'Glyma.05G073100' => 'gma', 'Glyma.06G015900' => 'gma', 'Glyma.06G172551' => 'gma', 'Glyma.06G172600' => 'gma', 'Glyma.06G172700' => 'gma', 'Glyma.11G247600' => 'gma', 'Glyma.12G161000' => 'gma', 'Glyma.16G044900' => 'gma', 'Glyma.16G081400' => 'gma', 'Glyma.18G009700' => 'gma', 'Glyma.19G078300' => 'gma', 'Glyma.19G106800' => 'gma', 'Gohir.A01G098600' => 'ghi', 'Gohir.A01G103000' => 'ghi', 'Gohir.A03G129200' => 'ghi', 'Gohir.A03G129300' => 'ghi', 'Gohir.A05G178000' => 'ghi', 'Gohir.A05G341400' => 'ghi', 'Gohir.A07G226000' => 'ghi', 'Gohir.A07G233000' => 'ghi', 'Gohir.A09G033540' => 'ghi', 'Gohir.A10G069600' => 'ghi', 'Gohir.A11G035400' => 'ghi', 'Gohir.A11G064900' => 'ghi', 'Gohir.A11G292300' => 'ghi', 'Gohir.A13G125600' => 'ghi', 'Gohir.D01G088300' => 'ghi', 'Gohir.D02G153000' => 'ghi', 'Gohir.D04G079500' => 'ghi', 'Gohir.D05G181400' => 'ghi', 'Gohir.D07G233200' => 'ghi', 'Gohir.D07G240200' => 'ghi', 'Gohir.D09G033900' => 'ghi', 'Gohir.D10G081900' => 'ghi', 'Gohir.D11G039000' => 'ghi', 'Gohir.D11G069200' => 'ghi', 'Gohir.D11G300100' => 'ghi', 'Gohir.D13G129400' => 'ghi', 'Gorai.001G268500' => 'gra', 'Gorai.001G276400' => 'gra', 'Gorai.002G108700' => 'gra', 'Gorai.002G114000' => 'gra', 'Gorai.005G172100' => 'gra', 'Gorai.006G038900' => 'gra', 'Gorai.007G041900' => 'gra', 'Gorai.007G074000' => 'gra', 'Gorai.007G336900' => 'gra', 'Gorai.009G186400' => 'gra', 'Gorai.011G088800' => 'gra', 'Gorai.012G089500' => 'gra', 'Gorai.013G145400' => 'gra', 'GSVIVG01001128001' => 'vvi', 'GSVIVG01001842001' => 'vvi', 'GSVIVG01007521001' => 'vvi', 'GSVIVG01010328001' => 'vvi', 'GSVIVG01013403001' => 'vvi', 'GSVIVG01032942001' => 'vvi', 'GSVIVG01036751001' => 'vvi', 'GSVIVG01037165001' => 'vvi', 'GSVIVG01037170001' => 'vvi', 'GSVIVG01037176001' => 'vvi', 'HanXRQChr03g0066571' => 'han', 'HanXRQChr03g0066871' => 'han', 'HanXRQChr03g0079671' => 'han', 'HanXRQChr03g0088231' => 'han', 'HanXRQChr05g0141611' => 'han', 'HanXRQChr05g0144801' => 'han', 'HanXRQChr07g0206871' => 'han', 'HanXRQChr08g0207371' => 'han', 'HanXRQChr09g0247191' => 'han', 'HanXRQChr09g0272941' => 'han', 'HanXRQChr10g0277961' => 'han', 'HanXRQChr10g0296431' => 'han', 'HanXRQChr11g0321921' => 'han', 'HanXRQChr11g0335651' => 'han', 'HanXRQChr11g0335661' => 'han', 'HanXRQChr12g0372271' => 'han', 'HanXRQChr13g0390971' => 'han', 'HanXRQChr15g0475141' => 'han', 'HanXRQChr15g0487051' => 'han', 'HanXRQChr15g0490921' => 'han', 'HanXRQChr15g0492501' => 'han', 'HanXRQChr16g0497871' => 'han', 'HanXRQChr17g0540201' => 'han', 'HanXRQChr17g0549561' => 'han', 'HanXRQChr17g0559241' => 'han', 'Haze_07259' => 'cav', 'Haze_07787' => 'cav', 'Haze_12343' => 'cav', 'Haze_12535' => 'cav', 'Haze_22838' => 'cav', 'Haze_26339' => 'cav', 'Haze_27199' => 'cav', 'Hma1.2p1_0279F.1_g112300' => 'hma', 'Hma1.2p1_0334F.1_g128490' => 'hma', 'Hma1.2p1_0612F.1_g188950' => 'hma', 'Hma1.2p1_0699F.1_g205530' => 'hma', 'Hma1.2p1_0699F.1_g205590' => 'hma', 'HPP92_002703' => 'vpl', 'HPP92_005956' => 'vpl', 'HPP92_008587' => 'vpl', 'HPP92_021576' => 'vpl', 'HPP92_024296' => 'vpl', 'HPP92_024301' => 'vpl', 'Hund01791' => 'sun', 'Hund05089' => 'sun', 'Hund06062' => 'sun', 'Hund06851' => 'sun', 'Hund10209' => 'sun', 'Hund10211' => 'sun', 'Hund12024' => 'sun', 'Hund12025' => 'sun', 'Lalb_Chr02g0156971' => 'lal', 'Lalb_Chr03g0033691' => 'lal', 'Lalb_Chr08g0236991' => 'lal', 'Lalb_Chr08g0246491' => 'lal', 'Lalb_Chr11g0069701' => 'lal', 'Lalb_Chr14g0363191' => 'lal', 'Lalb_Chr14g0364181' => 'lal', 'Lalb_Chr23g0265641' => 'lal', 'Lalb_Chr23g0273521' => 'lal', 'Lalb_Chr23g0277891' => 'lal', 'Lalb_Chr24g0403021' => 'lal', 'Lalb_Chr25g0284501' => 'lal', 'Lj1g0005457' => 'lja', 'Lj1g0008476' => 'lja', 'Lj2C12T18' => 'lonja', 'Lj2g0024327' => 'lja', 'Lj3A847T42' => 'lonja', 'Lj3C1064T9' => 'lonja', 'Lj3g0007601' => 'lja', 'Lj4A810T54' => 'lonja', 'Lj4g0007163' => 'lja', 'Lj6C821T3' => 'lonja', 'Lj6g0006503' => 'lja', 'Lj7C289G2' => 'lonja', 'Lj7C606T8' => 'lonja', 'Lj9C475T9' => 'lonja', 'Lju41C48T5' => 'lonja', 'Lsat_1_v5_gn_0_11900' => 'lsa', 'Lsat_1_v5_gn_0_33020' => 'lsa', 'Lsat_1_v5_gn_0_40540' => 'lsa', 'Lsat_1_v5_gn_3_29461' => 'lsa', 'Lsat_1_v5_gn_3_29480' => 'lsa', 'Lsat_1_v5_gn_4_185661' => 'lsa', 'Lsat_1_v5_gn_4_64540' => 'lsa', 'Lsat_1_v5_gn_4_77861' => 'lsa', 'Lsat_1_v5_gn_7_110780' => 'lsa', 'Lsat_1_v5_gn_8_151760' => 'lsa', 'Manes.04G096300' => 'mes', 'Manes.05G125200' => 'mes', 'Manes.06G116400' => 'mes', 'Manes.06G176700' => 'mes', 'Manes.11G072400' => 'mes', 'Manes.12G015500' => 'mes', 'Manes.13G015200' => 'mes', 'Manes.14G007500' => 'mes', 'Manes.14G054600' => 'mes', 'Manes.15G156700' => 'mes', 'Manes.17G107100' => 'mes', 'Manes.18G003300' => 'mes', 'Mapoly0035s0014' => 'mpo', 'Mapoly0035s0073' => 'mpo', 'Mapoly0055s0115' => 'mpo', 'Mapoly0057s0006' => 'mpo', 'Mapoly0206s0011' => 'mpo', 'MBI05_g16282_MAGBIO' => 'mbi', 'MBI06_g09278_MAGBIO' => 'mbi', 'MBI07_g31502_MAGBIO' => 'mbi', 'MBI08_g06882_MAGBIO' => 'mbi', 'MBI11_g07840_MAGBIO' => 'mbi', 'MBI11_g44433_MAGBIO' => 'mbi', 'MBI14_g09866_MAGBIO' => 'mbi', 'MBI15_g07478_MAGBIO' => 'mbi', 'MBI18_g20608_MAGBIO' => 'mbi', 'MCO01G036' => 'mco', 'MCO04G078' => 'mco', 'MCO05G131' => 'mco', 'MCO07G281' => 'mco', 'MCO15G366' => 'mco', 'MD00G1113600' => 'mdo', 'MD05G1234400' => 'mdo', 'MD06G1006400' => 'mdo', 'MD06G1006500' => 'mdo', 'MD06G1148800' => 'mdo', 'MD09G1000800' => 'mdo', 'MD09G1016900' => 'mdo', 'MD10G1210900' => 'mdo', 'MD13G1111300' => 'mdo', 'MD13G1111500' => 'mdo', 'MD16G1111100' => 'mdo', 'MD17G1003500' => 'mdo', 'MD17G1017300' => 'mdo', 'Medtr2g065470' => 'mtr', 'Medtr2g078600' => 'mtr', 'Medtr3g085850' => 'mtr', 'Medtr3g115920' => 'mtr', 'Medtr4g103920' => 'mtr', 'Medtr6g022630' => 'mtr', 'Medtr7g084800' => 'mtr', 'MELO3C002342.2' => 'cme', 'MELO3C002343.2' => 'cme', 'MELO3C008219.2' => 'cme', 'MELO3C012599.2' => 'cme', 'MELO3C014752.2' => 'cme', 'MELO3C017044.2' => 'cme', 'MELO3C019633.2' => 'cme', 'MELO3C031341.2' => 'cme', 'Migut.C00371' => 'egut', 'Migut.C00372' => 'egut', 'Migut.E00237' => 'egut', 'Migut.E00683' => 'egut', 'Migut.E00836' => 'egut', 'Migut.H00064' => 'egut', 'Migut.H01664' => 'egut', 'Migut.I00488' => 'egut', 'Migut.K00690' => 'egut', 'Migut.K01438' => 'egut', 'Migut.M01518' => 'egut', 'MSTRG.13677' => 'ama', 'MSTRG.14560' => 'ama', 'MSTRG.16096' => 'ama', 'MSTRG.22917' => 'ama', 'MSTRG.24072' => 'ama', 'MSTRG.24507' => 'ama', 'MSTRG.3107' => 'ama', 'MSTRG.7974' => 'ama', 'MSTRG.996' => 'ama', 'Nitab4.5_0000029g0270' => 'nta', 'Nitab4.5_0000029g0280' => 'nta', 'Nitab4.5_0000052g0270' => 'nta', 'Nitab4.5_0000407g0110' => 'nta', 'Nitab4.5_0000581g0150' => 'nta', 'Nitab4.5_0001664g0140' => 'nta', 'Nitab4.5_0001898g0030' => 'nta', 'Nitab4.5_0002198g0050' => 'nta', 'Nitab4.5_0002525g0010' => 'nta', 'Nitab4.5_0003777g0020' => 'nta', 'Nitab4.5_0004979g0020' => 'nta', 'Nitab4.5_0005327g0090' => 'nta', 'Nitab4.5_0006485g0040' => 'nta', 'Nitab4.5_0008861g0020' => 'nta', 'Nitab4.5_0008957g0030' => 'nta', 'Nitab4.5_0009646g0060' => 'nta', 'Nitab4.5_0009657g0020' => 'nta', 'Nitab4.5_0010299g0040' => 'nta', 'Nn2g13336' => 'nnu', 'Nn3g16192' => 'nnu', 'Nn4g22055' => 'nnu', 'Nn4g22422' => 'nnu', 'Nn4g23034' => 'nnu', 'Nn5g28582' => 'nnu', 'Nn5g31017' => 'nnu', 'Nn6g31673' => 'nnu', 'Nn7g38193' => 'nnu', 'Oeu017902.1' => 'oeu', 'Oeu017903.1' => 'oeu', 'Oeu019718.2' => 'oeu', 'Oeu020315.1' => 'oeu', 'Oeu026112.1' => 'oeu', 'Oeu032638.1' => 'oeu', 'Oeu037584.1' => 'oeu', 'Oeu038666.2' => 'oeu', 'Oeu043813.1' => 'oeu', 'Oeu044616.2' => 'oeu', 'Oeu048585.1' => 'oeu', 'Oeu062428.1' => 'oeu', 'Os02g0171100' => 'osa', 'Os02g0601300' => 'osa', 'Os03g0129300' => 'osa', 'Os04g0459500' => 'osa', 'Os04g0486600' => 'osa', 'Os06g0666600' => 'osa', 'Os08g0126300' => 'osa', 'Peaxi162Scf00064g01318' => 'pax', 'Peaxi162Scf00089g00323' => 'pax', 'Peaxi162Scf00128g00827' => 'pax', 'Peaxi162Scf00334g00112' => 'pax', 'Peaxi162Scf00421g00337' => 'pax', 'Peaxi162Scf00452g00210' => 'pax', 'Peaxi162Scf00680g00036' => 'pax', 'Peaxi162Scf00681g00227' => 'pax', 'Peaxi162Scf00763g00325' => 'pax', 'PGR031G2866' => 'pgr', 'PGR083G1433' => 'pgr', 'PGR083G2554' => 'pgr', 'PGR119G2300' => 'pgr', 'PGR142G0869' => 'pgr', 'PGR142G1039' => 'pgr', 'PGSC0003DMG400004130' => 'stu', 'PGSC0003DMG400009992' => 'stu', 'PGSC0003DMG400011246' => 'stu', 'PGSC0003DMG400011530' => 'stu', 'PGSC0003DMG400015253' => 'stu', 'PGSC0003DMG400017433' => 'stu', 'PGSC0003DMG400017434' => 'stu', 'PGSC0003DMG400026978' => 'stu', 'PGSC0003DMG400029406' => 'stu', 'PGSC0003DMG400036713' => 'stu', 'Phvul.001G098100' => 'pvu', 'Phvul.001G259000' => 'pvu', 'Phvul.004G057600' => 'pvu', 'Phvul.004G057700' => 'pvu', 'Phvul.005G059200' => 'pvu', 'Phvul.009G006600' => 'pvu', 'Phvul.009G168400' => 'pvu', 'Phvul.009G168500' => 'pvu', 'Potri.001G335800' => 'ptr', 'Potri.002G007100' => 'ptr', 'Potri.002G220566' => 'ptr', 'Potri.005G254100' => 'ptr', 'Potri.008G083900' => 'ptr', 'Potri.008G179300' => 'ptr', 'Potri.010G055400' => 'ptr', 'Potri.010G172400' => 'ptr', 'Potri.012G094100' => 'ptr', 'Potri.014G140500' => 'ptr', 'Potri.015G091400' => 'ptr', 'Pp3c11_15790' => 'ppa', 'Pp3c18_15450' => 'ppa', 'Pp3c1_13170' => 'ppa', 'Pp3c20_5060' => 'ppa', 'Pp3c21_9380' => 'ppa', 'Pp3c23_20200' => 'ppa', 'Pp3c23_20810' => 'ppa', 'Pp3c24_15670' => 'ppa', 'Pp3c24_16410' => 'ppa', 'Pp3c25_13970' => 'ppa', 'Pp3c2_24160' => 'ppa', 'Pp3c2_24270' => 'ppa', 'Pp3c6_170' => 'ppa', 'Pp3c6_80' => 'ppa', 'Pp3c7_14220' => 'ppa', 'Pp3c7_14300' => 'ppa', 'Pp3c8_21600' => 'ppa', 'PRCOL_00005298' => 'pco', 'Prupe.1G234000' => 'ppe', 'Prupe.3G300600' => 'ppe', 'Prupe.3G315500' => 'ppe', 'Prupe.4G131700' => 'ppe', 'Prupe.5G008000' => 'ppe', 'Prupe.5G155800' => 'ppe', 'Psat0s2200g0040' => 'psa', 'Psat1g005000' => 'psa', 'Psat1g083720' => 'psa', 'Psat1g116040' => 'psa', 'Psat1g133920' => 'psa', 'Psat2g071480' => 'psa', 'Psat2g076560' => 'psa', 'Psat3g091720' => 'psa', 'Psat3g173400' => 'psa', 'Psat3g193800' => 'psa', 'Psat4g082480' => 'psa', 'Psat5g010520' => 'psa', 'Psat5g052640' => 'psa', 'Psat5g052720' => 'psa', 'Psat5g094000' => 'psa', 'Psat5g278120' => 'psa', 'PSO007G0001' => 'pso', 'PSO017G1007' => 'pso', 'PSO017G6338' => 'pso', 'PSO040G0056' => 'pso', 'PSO063G0004' => 'pso', 'PSO478G0311' => 'pso', 'PSO478G3561' => 'pso', 'PSO541G0674' => 'pso', 'PSO541G5619' => 'pso', 'PSO675G2839' => 'pso', 'PSO675G3401' => 'pso', 'PSO782G4944' => 'pso', 'QL02p015244' => 'qlo', 'QL02p051555' => 'qlo', 'QL02p068153' => 'qlo', 'QL02p072785' => 'qlo', 'QL03p047999' => 'qlo', 'QL03p055023' => 'qlo', 'QL04p090732' => 'qlo', 'QL09p016656' => 'qlo', 'QL10p004789' => 'qlo', 'RcHm_v2.0_Chr1g0380411' => 'rch', 'RcHm_v2.0_Chr2g0151271' => 'rch', 'RcHm_v2.0_Chr2g0174371' => 'rch', 'RcHm_v2.0_Chr2g0174381' => 'rch', 'RcHm_v2.0_Chr2g0174391' => 'rch', 'RcHm_v2.0_Chr2g0174401' => 'rch', 'RcHm_v2.0_Chr2g0176741' => 'rch', 'RcHm_v2.0_Chr3g0486321' => 'rch', 'RcHm_v2.0_Chr4g0431271' => 'rch', 'RcHm_v2.0_Chr5g0024101' => 'rch', 'RcHm_v2.0_Chr7g0190831' => 'rch', 'RcHm_v2.0_Chr7g0209601' => 'rch', 'RcHm_v2.0_Chr7g0216231' => 'rch', 'Rhsim04G0003100' => 'rsi', 'Rhsim06G0004600' => 'rsi', 'Rhsim06G0243000' => 'rsi', 'Rhsim07G0257000' => 'rsi', 'Rhsim10G0010800' => 'rsi', 'Rhsim12G0015600' => 'rsi', 'Rhsim12G0035400' => 'rsi', 'Rhsim12G0106200' => 'rsi', 'Sabra02G0130400' => 'sbr', 'Sabra05G0197100' => 'sbr', 'Sabra08G0062200' => 'sbr', 'Sabra08G0136800' => 'sbr', 'Sabra10G0131600' => 'sbr', 'Sabra12G0068700' => 'sbr', 'Sabra14G0105900' => 'sbr', 'Sabra15G0113300' => 'sbr', 'Sabra16G0216800' => 'sbr', 'Sabra16G0216900' => 'sbr', 'SalBow1G8210' => 'sbo', 'SalBow2G0053' => 'sbo', 'SalBow3G1366' => 'sbo', 'SalBow5G1106' => 'sbo', 'SalBow5G2246' => 'sbo', 'SalBow6G7257' => 'sbo', 'SalBow7G0170' => 'sbo', 'SalBow7G0733' => 'sbo', 'SalBow8G1421' => 'sbo', 'SalBow8G2782' => 'sbo', 'SalBow8G3161' => 'sbo', 'Sc03g0006870' => 'sci', 'Sc03g0007060' => 'sci', 'Sc04g0000860' => 'sci', 'Sc09g0007780' => 'sci', 'Sc10g0010370' => 'sci', 'Sc11g0000010' => 'sci', 'Sc11g0000700' => 'sci', 'Sc15g0004120' => 'sci', 'Sc15g0004150' => 'sci', 'Sc22g0004110' => 'sci', 'Sed0004062' => 'sed', 'Sed0007215' => 'sed', 'Sed0008269' => 'sed', 'Sed0009028' => 'sed', 'Sed0017423' => 'sed', 'Sed0018374' => 'sed', 'Sed0020916' => 'sed', 'Sed0021379' => 'sed', 'Sed0026145' => 'sed', 'SEGI_10905' => 'sgi', 'SEGI_12343' => 'sgi', 'SEGI_19661' => 'sgi', 'SEGI_20864' => 'sgi', 'SEGI_24499' => 'sgi', 'SEGI_29051' => 'sgi', 'SEGI_29097' => 'sgi', 'SEGI_29964' => 'sgi', 'SEGI_35797' => 'sgi', 'SGA_v2.0_scaffold186G40192' => 'sas', 'SGA_v2.0_scaffold215G42306' => 'sas', 'SGA_v2.0_scaffold256G45660' => 'sas', 'SGA_v2.0_scaffold47G17553' => 'sas', 'SGA_v2.0_scaffold54G19636' => 'sas', 'SGA_v2.0_scaffold7G03618' => 'sas', 'SMO116G0445' => 'smo', 'SMO119G0362' => 'smo', 'SMO196G0251' => 'smo', 'SMO231G0004' => 'smo', 'SMO351G0251' => 'smo', 'Solyc01g098950.3' => 'sly', 'Solyc02g020940.3' => 'sly', 'Solyc03g111000.3' => 'sly', 'Solyc03g111010.4' => 'sly', 'Solyc04g009030.3' => 'sly', 'Solyc04g018055.1' => 'sly', 'Solyc04g082630.3' => 'sly', 'Solyc05g014470.3' => 'sly', 'Solyc05g014480.4' => 'sly', 'Solyc06g071920.4' => 'sly', 'Solyc10g005510.3' => 'sly', 'Sopen02g004990' => 'spe', 'Sopen03g030190' => 'spe', 'Sopen04g004210' => 'spe', 'Sopen04g036260' => 'spe', 'Sopen05g001830' => 'spe', 'Sopen05g006020' => 'spe', 'Sopen05g009560' => 'spe', 'Sopen06g028200' => 'spe', 'Sopen06g033430' => 'spe', 'Sopen10g001490' => 'spe', 'Sopen12g031540' => 'spe', 'Sp1g11470' => 'spa', 'Sp1g11910' => 'spa', 'Sp1g14490' => 'spa', 'Sp1g32120' => 'spa', 'Sp2g15770' => 'spa', 'Sp3g03090' => 'spa', 'Sp5g34590' => 'spa', 'TAR371G0072' => 'tar', 'TAR371G0841' => 'tar', 'TAR371G1231' => 'tar', 'TAR374G0435' => 'tar', 'TAR374G0467' => 'tar', 'TAR374G1417' => 'tar', 'TAR375G0373' => 'tar', 'TAR622G0526' => 'tar', 'TAR622G0788' => 'tar', 'TAR624G1170' => 'tar', 'TAR625G0491' => 'tar', 'TAR628G0411' => 'tar', 'TAR629G2643' => 'tar', 'TAR666G0002' => 'tar', 'THA.LOC104802386' => 'tha', 'THA.LOC104805257' => 'tha', 'THA.LOC104805297' => 'tha', 'THA.LOC104808134' => 'tha', 'THA.LOC104812377' => 'tha', 'THA.LOC104813182' => 'tha', 'THA.LOC104823967' => 'tha', 'THA.LOC104824027' => 'tha', 'THA.LOC104825695' => 'tha', 'THA.LOC104825726' => 'tha', 'Thecc.02G273500' => 'tca', 'Thecc.03G124300' => 'tca', 'Thecc.04G028100' => 'tca', 'Thecc.04G052700' => 'tca', 'Thecc.07G185000' => 'tca', 'Thecc.08G063200' => 'tca', 'Thhalv10004217m.g' => 'esa', 'Thhalv10004349m.g' => 'esa', 'Thhalv10007716m.g' => 'esa', 'Thhalv10007809m.g' => 'esa', 'Thhalv10008131m.g' => 'esa', 'Thhalv10018604m.g' => 'esa', 'Thhalv10021083m.g' => 'esa', 'Thhalv10021788m.g' => 'esa', 'TPR.G1595' => 'tpr', 'TPR.G20656' => 'tpr', 'TPR.G22126' => 'tpr', 'TPR.G22440' => 'tpr', 'TPR.G30018' => 'tpr', 'TPR.G38181' => 'tpr', 'TPR.G38488' => 'tpr', 'TWI14G1434' => 'twi', 'TWI18G1071' => 'twi', 'TWI32G0469' => 'twi', 'TWI34G0681' => 'twi', 'TWI36G0487' => 'twi', 'TWI36G0712' => 'twi', 'TWI36G1557' => 'twi', 'TWI38G0531' => 'twi', 'TWI38G1731' => 'twi', 'TWI39G1284' => 'twi', 'TWI56G1086' => 'twi', 'TWI75G1780' => 'twi', 'unitig_22.g6416' => 'ugi', 'unitig_22.g6946' => 'ugi', 'unitig_26.g10376' => 'ugi', 'unitig_35.g30194' => 'ugi', 'unitig_52.g17306' => 'ugi', 'unitig_578.g16238' => 'ugi', 'unitig_699.g19635' => 'ugi', 'unitig_699.g19947' => 'ugi', 'unitig_699.g19975' => 'ugi', 'unitig_747.g21106' => 'ugi', 'unitig_748.g7618' => 'ugi', 'unitig_749.g13285' => 'ugi', 'unitig_749.g13286' => 'ugi', 'unitig_8.g2911' => 'ugi', 'unitig_8.g3140' => 'ugi', 'unitig_8.g4817' => 'ugi', 'vmacro01005' => 'vma', 'vmacro01088' => 'vma', 'vmacro04418' => 'vma', 'vmacro05926' => 'vma', 'vmacro09769' => 'vma', 'vmacro11691' => 'vma', 'vmacro16140' => 'vma', 'vmacro16656' => 'vma', 'vmacro16711' => 'vma', 'vmacro19567' => 'vma', 'vmacro21781' => 'vma', 'VMungo0464G0648' => 'vmu', 'VMungo0464G0854' => 'vmu', 'VMungo0464G1891' => 'vmu', 'VMungo0720G1389' => 'vmu', 'VMungo1080G0678' => 'vmu', 'VMungo1309G1054' => 'vmu', 'VMungo1309G2495' => 'vmu', 'VMungo1383G2290' => 'vmu', 'VMungo1383G2840' => 'vmu', 'Zm00001eb002270' => 'zma', 'Zm00001eb080840' => 'zma', 'Zm00001eb173410' => 'zma', 'Zm00001eb184000' => 'zma', 'Zm00001eb207270' => 'zma', 'Zm00001eb233140' => 'zma', 'Zm00001eb246370' => 'zma', 'Zm00001eb261430' => 'zma', 'Zm00001eb424110' => 'zma', 'Zm00001eb424150' => 'zma', 'Zm00001eb424190' => 'zma' ) $gf_id = 'HOM05D000557' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000557' ) $data_identifier = 'HOM05D000557' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 27, 'aar' => (int) 6, 'aag' => (int) 4, 'ach' => (int) 15, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 7, 'atr' => (int) 8, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 22, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 6, 'cbr' => (int) 22, 'ccan' => (int) 7, 'cde' => (int) 6, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 10, 'cla' => (int) 6, 'col' => (int) 5, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 12, 'eca' => (int) 8, 'bvu' => (int) 7, 'egr' => (int) 11, 'fan' => (int) 21, 'fve' => (int) 10, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 10, 'han' => (int) 25, 'cav' => (int) 7, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 8, 'lal' => (int) 12, 'lja' => (int) 6, 'lonja' => (int) 9, 'lsa' => (int) 10, 'mes' => (int) 12, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 5, 'mdo' => (int) 13, 'mtr' => (int) 7, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 9, 'nta' => (int) 18, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 17, 'pco' => (int) 1, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 12, 'qlo' => (int) 9, 'rch' => (int) 13, 'rsi' => (int) 8, 'sbr' => (int) 10, 'sbo' => (int) 11, 'sci' => (int) 10, 'sed' => (int) 9, 'sgi' => (int) 9, 'sas' => (int) 6, 'smo' => (int) 5, 'sly' => (int) 11, 'spe' => (int) 11, 'spa' => (int) 7, 'tar' => (int) 14, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 7, 'twi' => (int) 12, 'ugi' => (int) 16, 'vma' => (int) 11, 'vmu' => (int) 9, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb424190' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1